FlexSemFlexSemAarhus University department of Ecoscience

 

Documentation publications
  • Larsen J, Mohn C, Pastor A, Maar M. A versatile marine modelling tool applied to arctic, temperate and tropical waters. PLOS ONE 2020 apr https://doi.org/10.1371/journal.pone.0231193

  • Larsen J, Maar M, Brüning T, She J, Mohn C. Flexsem: A new method for offline ocean modelling. Aarhus University, DCE – Danish Centre for Environment and Energy, 2017. 28 s. (Technical Report from DCE - Danish Centre for Environment and Energy; Nr. 105). http://dce2.au.dk/pub/TR105.pdf

  • Larsen J, Mohn C, Timmermann K. A novel model approach to bridge the gap between box models and classic 3D models in estuarine systems. Ecological Modelling 2013. https://doi.org/10.1016/j.ecolmodel.2013.06.030

  • Usage publications
  • Maar M, Larsen J, Butenschön M, Kristiansen T, Thodsen H, Taylor D, Schourup-Kristensen. Impacts of climate change on water quality, benthic mussels, and suspended mussel culture in a shallow, eutrophic estuary. Heliyon 2024. https://doi.org/10.1016/j.heliyon.2024.e25218

  • Pastor A, Ospina-Alvarez A, Hansen FT, Larsen J, Schourup-Kristensen V, Maar M. Potential climate change effects on mussel larvae dispersal in a Danish estuary based on sensitivity analysis of a biophysical model. Regional Studies in Marine Science 2023. https://doi.org/10.1016/j.rsma.2023.103260

  • Schourup-Kristensen V, Larsen J, Stæhr PAU, Maar M. Modelled dispersal pathways of non-indigenous species in the Danish Wadden Sea. Marine Environmental Research 2023 https://doi.org/10.1016/j.marenvres.2023.106111

  • Maar M, Larsen J, Schourup-Kristensen V, Taylor D. Nutrient extraction and ecosystem impact by suspended mussel mitigation cultures at two contrasting sites. Science of The Total Environment 2023.http://dx.doi.org/10.1016/j.scitotenv.2023.164168

  • Larsen J, Maar M, Rasmussen ML, Hansen LB, Hamad IY, Stæhr PAU. High-resolution hydrodynamics of coral reefs and tracing of pollutants from hotel areas along the west coast of Unguja Island, Zanzibar. Marine Pollution Bulletin 2023 https://doi.org/10.1016/j.marpolbul.2023.114968

  • Schourup-Kristensen V, Larsen J, Maar M. Drivers of hypoxia variability in a shallow and eutrophicated semi-enclosed fjord. Marine Pollution Bulletin 2023 https://doi.org/10.1016/j.marpolbul.2023.114621

  • Maar M, Larsen J, Schourup-Kristensen V. Intensified Mussel Farming; Impacts on Nutrient Budgets and Ecology in a Eutrophic Semi-enclosed Fjord System. Journal of Geophysical Research: Biogeosciences 2023 https://doi.org/10.1029/2022JG007312

  • Møller EF, Christensen A, Larsen J, Mankoff KD, Ribergaard MH, Sejr MK et al. The sensitivity of primary productivity in Disko Bay, a coastal Arctic ecosystem to changes in freshwater discharge and sea ice cover. EGUsphere 2023 https://doi.org/10.5194/os-19-403-2023

  • Pastor A, Ospina-Alvarez A, Larsen J, Hansen FT, Krause-Jensen D, Maar M. A network analysis of connected biophysical pathways to advice eelgrass (Zostera marina) restoration. Marine Environmental Research 2022. https://doi.org/10.1016/j.marenvres.2022.105690

  • Schourup-Kristensen V, Maar M, Larsen J, Mohn C, Murawski J, She J, Jakobsen HH. Methodology for defining homogeneous water bodies for management purposes. Marine Pollution Bulletin 2021. https://doi.org/10.1016/j.marpolbul.2021.113004

  • Pastor A, Larsen J, Hansen FT, Simon A, Bierne N, Maar M. Agent-based modeling and genetics reveal the Limfjorden, Denmark, as a well-connected system for mussel larvae. Mar Ecol Prog Ser :DYNMODav2 2021. https://doi.org/10.3354/meps13559

  • Maar, M., Larsen, J., Saurel, C. et al. Mussel transplantation as a tool to mitigate hypoxia in eutrophic areas. Hydrobiologia 2021. https://doi.org/10.1007/s10750-021-04545-6

  • Taylor D, Larsen J, Buer AL, Friedland R, Holbach A, Petersen JK et al. Mechanisms influencing particle depletion in and around mussel farms in different environments. Ecological Indicators. 2021 mar https://doi.org/10.1016/j.ecolind.2020.107304

  • Pastor A, Larsen J, Mohn C, Saurel C, Petersen JK, Maar M. Sediment transport model quantifies plume size and light conditions from mussel dredging. Frontiers in Marine Science 2020 https://doi.org/10.3389/fmars.2020.576530

  • von Thenen M, Maar M, Hansen HS, Friedland R, Schiele KS. Applying a combined geospatial and farm scale model to identify suitable locations for mussel farming. Marine Pollution Bulletin. 2020 julhttps://doi.org/10.1016/j.marpolbul.2020.111254

  • Maar M, Larsen J, von Thenen M, Dahl K. Site selection of mussel mitigation cultures in relation to efficient nutrient compensation of fish farming. Aquaculture Environment Interactions. 2020 https://doi.org/10.3354/AEI00361

  • Carstensen J, Fruergaard M, Larsen J, Christensen JPA. Kystzonen som filter for næringsstoffer. Aktuel Naturvidenskab 2019 nr 04. https://aktuelnaturvidenskab.dk/fileadmin/Aktuel_Naturvidenskab/nr-4/AN4-2019-kystzonefilter.pdf

  • Maar M, Larsen J, Dahl K, Riemann B. Modelling the environmental impacts of future offshore fish farms in the inner Danish waters. Aquaculture Environment Interactions. 2018;10:115-133. https://doi.org/10.3354/aei00259

  • Petersen ME, Maar M, Larsen J, Møller EF, Hansen PJ. Trophic cascades of bottom-up and top-down forcing on nutrients and plankton in the Kattegat, evaluated by modelling. Journal of Marine Systems. 2017 https://doi.org/10.1016/j.jmarsys.2017.01.006